The detailed information of tRNA gene sequence


Sequence ID>SRA1000189
Genome IDSRR001036.301907
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 115
End posion on genome 38
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnng
tRNA gene sequence 
GGGGCCGTAGCTCAGGTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGTAGGTTCAA
CTCCTACTCGGCCCACCA
Downstream region at tRNA end position 
tttttccgca
Secondary structure (Cloverleaf model)
>SRA1000189	Ile	GAT
                   g      ACCA tttttccgca
                     G - C
                     G - C
                     G - C
                     G   G
                     C - G
                     C   C
                     G + T          T C
                    T     C A T C C     A
    T G G A        A      | | | | |     A
  G         C T C G       G T A G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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