The detailed information of tRNA gene sequence


Sequence ID>SRA1000195
Genome IDSRR001036.309583
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 44
End posion on genome 117
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccgaccatg
tRNA gene sequence 
CGGCCCTTCGTCTAGCGGTCAGGACGCCGCCCTCTCACGGCGAAAACACGGGTTCGATTC
CCGTAGGGTCACCAa
Downstream region at tRNA end position 
cacnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000195	Glu	CTC
                   g      CCAa cacnnnnnnn
                     C   A
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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