The detailed information of tRNA gene sequence


Sequence ID>SRA1000219
Genome IDSRR001037.115269
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 109
End posion on genome 19
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnngcaG
tRNA gene sequence 
GAGAAGTTGGCTGAGTGGTCGAAAGCGTCGCACTCGAAATGCGAAGTGCCGGCAACGGTA
CCGAGGGTTCGAATCCCTCACTCTCCTCCA
Downstream region at tRNA end position 
tttttctaca
Secondary structure (Cloverleaf model)
>SRA1000219	Ser	CGA
                   G      TCCA tttttctaca
                     G - C
                     A   C
                     G + T
                     A   C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     AGTGCCGGCAACGGTACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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