The detailed information of tRNA gene sequence


Sequence ID>SRA1000233
Genome IDSRR001037.191235
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 7
End posion on genome 99
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnccatgc
tRNA gene sequence 
GGAGACGTGGGTCGAGTGGCTGAAACCAACGGTTTGCTAAACCGTCGTGCTGTGAATGCG
GCACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
cttctttttc
Secondary structure (Cloverleaf model)
>SRA1000233	Ser	GCT
                   c      GCCA cttctttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    T G A G        G      | | | | |     G
  G         C T G G       G A G G G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CGTGCTGTGAATGCGGCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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