The detailed information of tRNA gene sequence


Sequence ID>SRA1000235
Genome IDSRR001037.204687
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cagggccggt
tRNA gene sequence 
CGGGACGTAGCGCAGCCTGGTAGCGCATCACACTGGGGGTGTGGGGGTCGGAGGTTCGAA
TCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
attttaccgc
Secondary structure (Cloverleaf model)
>SRA1000235	Pro	GGG
                   t      ACCA attttaccgc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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