The detailed information of tRNA gene sequence


Sequence ID>SRA1000236
Genome IDSRR001037.217667
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 16
End posion on genome 105
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacgggcatt
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACTGGTCTTGAAAACCAGCGATGGGGAAACCTAT
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
acgccccctg
Secondary structure (Cloverleaf model)
>SRA1000236	Ser	TGA
                   t      GCCA acgccccctg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGATGGGGAAACCTATCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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