The detailed information of tRNA gene sequence


Sequence ID>SRA1000259
Genome IDSRR001038.14137
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 11
End posion on genome 86
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggcaatagt
tRNA gene sequence 
AGGGGTTTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCTCAGCCCCTGCCA
Downstream region at tRNA end position 
tttgctttgt
Secondary structure (Cloverleaf model)
>SRA1000259	Trp	CCA
                   t      GCCA tttgctttgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A          T G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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