The detailed information of tRNA gene sequence


Sequence ID>SRA1000262
Genome IDSRR001038.30419
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 14
End posion on genome 90
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctataaataa
tRNA gene sequence 
GCACCCATAGCTCAACTGGATAGAGCACCGGCCTTCTAAGCCGGGGGTTTCAGGTTCAAG
TCCTGATGGGTGTACCA
Downstream region at tRNA end position 
cataacgtcg
Secondary structure (Cloverleaf model)
>SRA1000262	Arg	TCT
                   a      ACCA cataacgtcg
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     A G T C C     A
      C A A        A      | | | | |     A
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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