The detailed information of tRNA gene sequence


Sequence ID>SRA1000268
Genome IDSRR001038.85846
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 2
End posion on genome 77
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGGGCTGTAGCTCATTTGGGAGAGCGTTTCCCTTGCACGGAAGAGGTAGCAAGTTCGATT
CTTGTCAGCTCCACCA
Downstream region at tRNA end position 
ttttttctga
Secondary structure (Cloverleaf model)
>SRA1000268	Ala	TGC
                   t      ACCA ttttttctga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T G T T C     A
      T T A        A      + | | | |     G
    T       C T C G       G C A A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    T + G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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