The detailed information of tRNA gene sequence


Sequence ID>SRA1000271
Genome IDSRR001038.131482
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttaggcttta
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCACAGGTTCGAA
TCCTGTCGGGCGTACCA
Downstream region at tRNA end position 
cacataaaga
Secondary structure (Cloverleaf model)
>SRA1000271	Arg	TCT
                   a      ACCA cacataaaga
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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