The detailed information of tRNA gene sequence


Sequence ID>SRA1000281
Genome IDSRR001038.250246
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 16
End posion on genome 92
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taagttataa
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCACAGGTTCGAA
TCCTGTCGGGCGTACTA
Downstream region at tRNA end position 
catattgtat
Secondary structure (Cloverleaf model)
>SRA1000281	Arg	TCT
                   a      ACTA catattgtat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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