The detailed information of tRNA gene sequence


Sequence ID>SRA1000285
Genome IDSRR001038.275715
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 104
End posion on genome 28
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnncg
tRNA gene sequence 
GGGCTTTTAGCTCAGTTGGTCAGAGCACCCGTCTCATACACGGAATGTCCTCGGTTCGAG
TCCGAGAAAGCCCACCA
Downstream region at tRNA end position 
tatacgcgcc
Secondary structure (Cloverleaf model)
>SRA1000285	Met	CAT
                   g      ACCA tatacgcgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     T - A          T G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     ATGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    T - A
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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