The detailed information of tRNA gene sequence


Sequence ID>SRA1000286
Genome IDSRR001038.278107
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 93
End posion on genome 17
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taagttntaa
tRNA gene sequence 
GNGCCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCACAGGTTCAAA
TCCTGTCGGGCGTACTA
Downstream region at tRNA end position 
catatttaca
Secondary structure (Cloverleaf model)
>SRA1000286	Arg	TCT
                   a      ACTA catatttaca
                     G + T
                     N   G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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