The detailed information of tRNA gene sequence


Sequence ID>SRA1000288
Genome IDSRR001038.298952
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 100
End posion on genome 24
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gcttatcaac
tRNA gene sequence 
TGGGGCGTAGTTCAGTTGGTTAGAGCGTCTGTCTTATACACAGGAAGTCGCGGGTTCAAG
TCCCGCCGCCCCAACAA
Downstream region at tRNA end position 
tttattatat
Secondary structure (Cloverleaf model)
>SRA1000288	Ile	TAT
                   c      ACAA tttattatat
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | | | | |     A
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     AAGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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