The detailed information of tRNA gene sequence


Sequence ID>SRA1000289
Genome IDSRR001038.301039
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 97
End posion on genome 22
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnntttttcN
tRNA gene sequence 
GCGCTCGTAGCTCAGTTGGATAGAGCAGTTGACTTCTAATCAACAGGTCGAAGGTTCGAG
TCCTTCCGAGCGTGTta
Downstream region at tRNA end position 
tcatgaatga
Secondary structure (Cloverleaf model)
>SRA1000289	Arg	TCT
                   N      GTta tcatgaatga
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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