The detailed information of tRNA gene sequence


Sequence ID>SRA1000294
Genome IDSRR001038.354147
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 106
End posion on genome 21
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnngtgtT
tRNA gene sequence 
GCTGACATGCCCGAGTTGGTCTAAGGGGGAAGATTTAAGCTCTTCTGTATTTAATACTCG
TGGGTTCGAATCCCACTGTCAGCATat
Downstream region at tRNA end position 
ccgtcgttcg
Secondary structure (Cloverleaf model)
>SRA1000294	Leu	TAA
                   T      ATat ccgtcgttcg
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C C       G T G G G     C
  G           | | |                 T T
  T         A G G G
    C T A          G     TGTATTTAATACTC
                    G - C
                    A - T
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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