The detailed information of tRNA gene sequence


Sequence ID>SRA1000308
Genome IDSRR001039.109170
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Kingman Atoll (SRP000131)
Species
Start position on genome 113
End posion on genome 29
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnngattta
tRNA gene sequence 
AGGAGGGTGGCAGAGCGGTAAATGCAACGGACTGTAACTCCGTCGGGGCAACCCTACATA
GGTTCGAATCCTATCCCCTCCACCA
Downstream region at tRNA end position 
tatttttgat
Secondary structure (Cloverleaf model)
>SRA1000308	Tyr	GTA
                   a      ACCA tatttttgat
                     A   C
                     G - C
                     G + T
                     A   C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     G
    G       G A C G       A T A G G     C
    G         | | |                 T T
    T       A T G C
      A A          A     CGGGGCAACCCTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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