The detailed information of tRNA gene sequence


Sequence ID>SRA1000309
Genome IDSRR001039.109862
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Kingman Atoll (SRP000131)
Species
Start position on genome 27
End posion on genome 101
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgccaagcgc
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACGCCAGGTTTTCAACCTGGAAAGAGGGGTTCGATTC
CCCTACGGGCTGCCA
Downstream region at tRNA end position 
ttggcgtgac
Secondary structure (Cloverleaf model)
>SRA1000309	Glu	TTC
                   c      GCCA ttggcgtgac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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