The detailed information of tRNA gene sequence


Sequence ID>SRA1000339
Genome IDSRR001041.42279
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 120
End posion on genome 47
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
nnnnnnngtt
tRNA gene sequence 
GTCCGCGTGGCCCAACGGATAAGGCATCTGACTACGAATCAGGAGATTGCGGGTTCGAAT
CCCGTCGTGGACTCtt
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>SRA1000339	Arg	ACG
                   t      TCtt ttttattttt
                     G - C
                     T - A
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C A A        G      + | | | |     G
    G       C C C G       G C G G G     C
    G         | | |                 T T
    A       A G G C
      T A          A     AGATT
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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