The detailed information of tRNA gene sequence


Sequence ID>SRA1000358
Genome IDSRR001041.236739
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 74
End posion on genome 3
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccatccgcgt
tRNA gene sequence 
GCCAATGTAGCTTAGTGGTAGAGCGTCTGCTTCGTAAGCAGAAGGTCGCGGGTTCGATCC
CCGTCGTTGGCTgtn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000358	Thr	CGT
                   t      Tgtn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     T + G
                     G - C          C T
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     T T C G       G C G G G     C
      G     + | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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