The detailed information of tRNA gene sequence


Sequence ID>SRA1000363
Genome IDSRR001042.1411
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 1
End posion on genome 90
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGATGTGGGTGAGTGGCTGAAACCAGGTCCTTGCTAAGGATCCGAACCTTCACGGGTT
CCCAGAGTTCGAATCTCTGCGTCTCCGCCA
Downstream region at tRNA end position 
ttagatatta
Secondary structure (Cloverleaf model)
>SRA1000363	Ser	GCT
                   n      GCCA ttagatatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     G T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       C A G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGAACCTTCACGGGTTCC
                    G - C
                    G + T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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