The detailed information of tRNA gene sequence


Sequence ID>SRA1000370
Genome IDSRR001042.9386
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnng
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTCAAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
atttatctta
Secondary structure (Cloverleaf model)
>SRA1000370	Met	CAT
                   g      ACCA atttatctta
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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