The detailed information of tRNA gene sequence


Sequence ID>SRA1000380
Genome IDSRR001042.28665
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnngtt
tRNA gene sequence 
CGGGAAGTGGCGCAGGTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAGT
CCTGTCTTCCCGACAA
Downstream region at tRNA end position 
agccaaaaca
Secondary structure (Cloverleaf model)
>SRA1000380	Pro	TGG
                   t      ACAA agccaaaaca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T G T C C     A
      G G A        G      + | | | |     G
    T       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK