The detailed information of tRNA gene sequence


Sequence ID>SRA1000382
Genome IDSRR001042.31393
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 87
End posion on genome 1
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
gattaggttt
tRNA gene sequence 
GCGCGGGTGGCGGAACTGGTAGACGCGCAGGATTAAGGATCCTGTGGGGTAAAACCCGTG
GAGGTTCGAGTCGTCTTCCGCGCACAA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000382	Leu	AAG
                   t      ACAA nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T          T G
                    T     T C T G C     A
      C A A        G      + | |   |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGGTAAAACCCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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