The detailed information of tRNA gene sequence


Sequence ID>SRA1000392
Genome IDSRR001042.48534
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 86
End posion on genome 12
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nntagcataa
tRNA gene sequence 
GCCGATGTAGCTCAGCTGGCTAGAGCAGCTGATTTGTAATCAGCAGGTCGTGGGTTCGAG
TCCCTCCATCGGCTCag
Downstream region at tRNA end position 
ttctttaaan
Secondary structure (Cloverleaf model)
>SRA1000392	Thr	TGT
                   a      TCag ttctttaaan
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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