The detailed information of tRNA gene sequence


Sequence ID>SRA1000398
Genome IDSRR001042.53692
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 126
End posion on genome 52
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ngaataatag
tRNA gene sequence 
GCCCTGGTGGTGAAATGGTTATCACGAAAGTTTGTGGAACTTTAGTTTTTGGTTCAATTC
CAAGCCAGGGTACCA
Downstream region at tRNA end position 
aaaaatgaat
Secondary structure (Cloverleaf model)
>SRA1000398	His	GTG
                   g      ACCA aaaaatgaat
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T T
                    T     G A A C C     A
      T A A        G      + | | | |     A
    G       A G T G       T T T G G     C
    G       | | | |                 T T
    T       T C A C
      T A          G     AGTT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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