The detailed information of tRNA gene sequence


Sequence ID>SRA1000399
Genome IDSRR001042.54444
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 73
End posion on genome -1
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attaactttt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAACGGACTCATAATCCGTCGGTCGCAGGTTCGAG
TCCTGCCGGGCCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000399	Met	CAT
                   t      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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