The detailed information of tRNA gene sequence


Sequence ID>SRA1000406
Genome IDSRR001042.70980
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 128
End posion on genome 55
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCCCTATAGTTAAATGGTATAACACATCCATGGTAAGGATGAGTTTCCAGTTCAATTCT
GGGTGGGGGCACCA
Downstream region at tRNA end position 
gaattatttt
Secondary structure (Cloverleaf model)
>SRA1000406	Thr	GGT
                   n      ACCA gaattatttt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G G G T C     A
        A A        A      + | | | |     A
      T     A T T G       T C C A G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     AGTT
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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