The detailed information of tRNA gene sequence


Sequence ID>SRA1000408
Genome IDSRR001042.81309
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 106
End posion on genome 33
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaaaaaaat
tRNA gene sequence 
GCCCTCATAGTTAAATGGTATAACACATCCATGGTAAGGATGAGTTTCCAGTTCAATTCT
GGGTGAGGGCACCA
Downstream region at tRNA end position 
gttatttgta
Secondary structure (Cloverleaf model)
>SRA1000408	Thr	GGT
                   t      ACCA gttatttgta
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T T
                    T     G G G T C     A
        A A        A      + | | | |     A
      T     A T T G       T C C A G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     AGTT
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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