The detailed information of tRNA gene sequence


Sequence ID>SRA1000409
Genome IDSRR001042.83106
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 94
End posion on genome 6
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
attaattgtt
tRNA gene sequence 
GCCCGGGTGGTGGAATTGGTAGACACGTTGGACTTAAAATCCAATGAGCAGTAATGCTCG
TACGGGTTCAAGTCCCGTCCCGGGTACAA
Downstream region at tRNA end position 
aaaaannnnn
Secondary structure (Cloverleaf model)
>SRA1000409	Leu	TAA
                   t      ACAA aaaaannnnn
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T A A        G      | | | | |     A
    T       G G T G       A C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGAGCAGTAATGCTCGT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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