The detailed information of tRNA gene sequence


Sequence ID>SRA1000410
Genome IDSRR001042.84708
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 99
End posion on genome 23
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttatcttatg
tRNA gene sequence 
GTGGCTGTAGCTCAGTTGGTTAAGAGCGCTGGTTTGTGGTACCGGAGGCCGGGGGTTCAA
ATCCCCTCAGCCACCCAt
Downstream region at tRNA end position 
ttatttcttg
Secondary structure (Cloverleaf model)
>SRA1000410	His	GTG
                   g      CCAt ttatttcttg
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
    T T G A        A      + | | | |     A
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T A A          G     AGGCC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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