The detailed information of tRNA gene sequence


Sequence ID>SRA1000413
Genome IDSRR001042.90219
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 83
End posion on genome 10
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aagctagtat
tRNA gene sequence 
TGGGGCGTAGCCAAGCGGTAAGGCACGGGTTTTTGGTACCTGCATCCTAGGTTCGAATCC
TAGCGCCCCAGCCA
Downstream region at tRNA end position 
tttatgaaan
Secondary structure (Cloverleaf model)
>SRA1000413	Gln	TTG
                   t      GCCA tttatgaaan
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G A T C C     A
        G A        A      | | | | |     G
      C     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    C - G
                    G + T
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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