The detailed information of tRNA gene sequence


Sequence ID>SRA1000414
Genome IDSRR001042.90898
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 98
End posion on genome 24
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctacccttac
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTCAGAGCACCCGGCTCATACCCGGATTGTCCTGGGTTCAAG
TCCCAGAGAGCCCACtt
Downstream region at tRNA end position 
tcaatgcacc
Secondary structure (Cloverleaf model)
>SRA1000414	Met	CAT
                   c      ACtt tcaatgcacc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T G
                    T     G A C C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TTGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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