The detailed information of tRNA gene sequence


Sequence ID>SRA1000418
Genome IDSRR001042.99783
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 6
End posion on genome 90
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnnngacag
tRNA gene sequence 
GCCCCATTGGCGGAATTGGTAGACGCGCGTGACTCAAAATCGCGTTCCCTCGGGAGTATC
TGTTCGACTCAGATATGGGGCACCA
Downstream region at tRNA end position 
aactaaaaat
Secondary structure (Cloverleaf model)
>SRA1000418	Leu	CAA
                   g      ACCA aactaaaaat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T C
                    T     T A G A C     A
      T A A        G      | | | | |     G
    T       G G C G       A T C T G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCCCTCGGGAGT
                    C - G
                    G - C
                    T + G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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