The detailed information of tRNA gene sequence


Sequence ID>SRA1000423
Genome IDSRR001042.114896
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 13
End posion on genome 105
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaagcttgt
tRNA gene sequence 
GGTGAGATGGGTGAGTTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGTATTTAACTA
TGCTACCGAGGGTTCGAATCCCTCTCTCACGCAat
Downstream region at tRNA end position 
taattaaagt
Secondary structure (Cloverleaf model)
>SRA1000423	Ser	GCT
                   t      CAat taattaaagt
                     G   G
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGTATTTAACTATGCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK