The detailed information of tRNA gene sequence


Sequence ID>SRA1000432
Genome IDSRR001042.126368
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 4
End posion on genome 80
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnncac
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCAGTGGTTCGAT
CCCACTTCCCGCTACCA
Downstream region at tRNA end position 
aacattatga
Secondary structure (Cloverleaf model)
>SRA1000432	Met	CAT
                   c      ACCA aacattatga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          C T
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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