The detailed information of tRNA gene sequence


Sequence ID>SRA1000433
Genome IDSRR001042.126893
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 12
End posion on genome 88
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaattttat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCAGTGGTTCGAT
CCCACTTCCCGCTACCA
Downstream region at tRNA end position 
tttaataatt
Secondary structure (Cloverleaf model)
>SRA1000433	Met	CAT
                   t      ACCA tttaataatt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C T
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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