The detailed information of tRNA gene sequence


Sequence ID>SRA1000435
Genome IDSRR001042.131686
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 79
End posion on genome 4
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
caactcaaaa
tRNA gene sequence 
GCGGGAATAGCTCAGCTGGTAGAGCGCAACCTTGCCAAGGTTGAGGTCGCGAGTTCGAAC
CTCGTTTCCCGCTCCA
Downstream region at tRNA end position 
tttnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000435	Gly	GCC
                   a      TCCA tttnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C A
                    T     T G C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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