The detailed information of tRNA gene sequence


Sequence ID>SRA1000442
Genome IDSRR001042.144343
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 49
End posion on genome 124
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accaaaaatg
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGATCGCCTGTCACGCGATAGGTCGCGGGTTCGAG
TCCCGTCACTCCCGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000442	Asp	GTC
                   g      GCCn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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