The detailed information of tRNA gene sequence


Sequence ID>SRA1000449
Genome IDSRR001042.155668
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 92
End posion on genome 19
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaactctgt
tRNA gene sequence 
GGCGAGTTGGCGGAGTGGTGACGCAGCGGATTGCAAATCCGTGTACACCGGTTCGATTCC
GGTACTCGCCTCCA
Downstream region at tRNA end position 
gatttacatt
Secondary structure (Cloverleaf model)
>SRA1000449	Cys	GCA
                   t      TCCA gatttacatt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      T     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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