The detailed information of tRNA gene sequence


Sequence ID>SRA1000452
Genome IDSRR001042.160025
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 103
End posion on genome 14
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcttttgtac
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCACCGGTCTTGAAAACCGGCAAAGGGGCAACTCTT
TCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
tcatttaatt
Secondary structure (Cloverleaf model)
>SRA1000452	Ser	TGA
                   c      GCCA tcatttaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAAAGGGGCAACTCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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