The detailed information of tRNA gene sequence


Sequence ID>SRA1000456
Genome IDSRR001042.165432
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 101
End posion on genome 12
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgatttttt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCTTGGAAAGCGTGTAAAGGGGAAACTCTT
TCATGGGTTCGAATCCCATTCTCTCCGCCA
Downstream region at tRNA end position 
aattagagtc
Secondary structure (Cloverleaf model)
>SRA1000456	Ser	GGA
                   t      GCCA aattagagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAAGGGGAAACTCTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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