The detailed information of tRNA gene sequence


Sequence ID>SRA1000463
Genome IDSRR001042.178350
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 77
End posion on genome 3
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cggtgaccga
tRNA gene sequence 
GGCTCTGTGGTGTAACGGATAGCATAGGAGGCTTCGAACCTCTTGATCTCGGTTCGATTC
CGGGCAGGGCCGCCA
Downstream region at tRNA end position 
gtnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000463	Arg	TCG
                   a      GCCA gtnnnnnnnn
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A
                     G - C          T T
                    T     G G G C C     A
      C A A        G      | + | | |     G
    G       T G T G       C T C G G     C
    G       + | | +                 T T
    A       G C A T
      T A          A     TGAT
                    G + T
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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