The detailed information of tRNA gene sequence


Sequence ID>SRA1000466
Genome IDSRR001042.181771
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 2
End posion on genome 75
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GCCGTGTTGGCGCAATTGGATAGCGCGTAGGACTTCTAATCCTAAGGTTGTGGGTTCGAG
TCCCACACATGGTAtat
Downstream region at tRNA end position 
tatttattat
Secondary structure (Cloverleaf model)
>SRA1000466	Arg	TCT
                   c      Atat tatttattat
                     G + T
                     C - G
                     C - G
                     G + T
                     T - A
                     G - C
                     T - A          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      A T A        G     AGGTT
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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