The detailed information of tRNA gene sequence


Sequence ID>SRA1000469
Genome IDSRR001042.188901
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 109
End posion on genome 34
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccgagcaga
tRNA gene sequence 
GGCCCCGTCGTCTAGAGGCCTAGGACGCTGCCCTCTCAAGGCAGAAACGCCGGTTCAAAT
CCGGTCGGGGCTGCTA
Downstream region at tRNA end position 
atctgatatt
Secondary structure (Cloverleaf model)
>SRA1000469	Glu	CTC
                   a      GCTA atctgatatt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      A G A        C      + | | | |     A
    G       T C T G       G C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     AAAC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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