The detailed information of tRNA gene sequence


Sequence ID>SRA1000470
Genome IDSRR001042.188903
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 130
End posion on genome 57
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttaattttt
tRNA gene sequence 
GCCCCTATAGTTAAATGGCATAACGTGACCATGGTAAGGTTAAATTTCAAGTTCGATTCT
TGGTGGGGGCACCA
Downstream region at tRNA end position 
aaaatttcat
Secondary structure (Cloverleaf model)
>SRA1000470	Thr	GGT
                   t      ACCA aaaatttcat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G G T T C     A
        A A        A      + | | | |     G
      T     A T T G       T C A A G     C
      G     | | | |                 T T
      G     T A A C
        C A        G     AATT
                    T - A
                    G + T
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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