The detailed information of tRNA gene sequence


Sequence ID>SRA1000475
Genome IDSRR001042.193761
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 10
End posion on genome 85
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
natgatgcaa
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGAAGAGCACCTGCTTTGCAAGCAGGGGGTCGTGGGTTCAAGT
CCCATCATCTCCACAA
Downstream region at tRNA end position 
caaggtaacc
Secondary structure (Cloverleaf model)
>SRA1000475	Ala	TGC
                   a      ACAA caaggtaacc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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