The detailed information of tRNA gene sequence


Sequence ID>SRA1000486
Genome IDSRR001042.231793
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 75
End posion on genome 1
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaaaactgt
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAG
TCCCGTCACTCCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000486	Asp	GTC
                   t      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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