The detailed information of tRNA gene sequence


Sequence ID>SRA1000496
Genome IDSRR001042.260017
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 81
End posion on genome 6
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tttactgttt
tRNA gene sequence 
GCCGGAGTAGCTCAGTGGCCAGAGCAGCCGACTTGTAATCGGCAGGTCAGGGGTTCGACT
CCCCTCTCCGGCTCTA
Downstream region at tRNA end position 
agtgannnnn
Secondary structure (Cloverleaf model)
>SRA1000496	Thr	TGT
                   t      TCTA agtgannnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    G       C T C G       A G G G G     C
    G       | | | |                 T T
    C       G A G C
      C A          A     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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