The detailed information of tRNA gene sequence


Sequence ID>SRA1000501
Genome IDSRR001042.273146
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 88
End posion on genome 14
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aaaaacatct
tRNA gene sequence 
TGGGGTGTAGCCAAGTGGTAAGGCAGCGGTTTTTGGTACCGCCATTCCTAGGTTCGAATC
CTAGCACCCCAGCCA
Downstream region at tRNA end position 
tttatgaaag
Secondary structure (Cloverleaf model)
>SRA1000501	Gln	TTG
                   t      GCCA tttatgaaag
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G A T C C     A
        G A        A      | | | | |     G
      T     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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